You can take honey that has crystalized and set it in sunlight to "melt" back into the gooey goodness, but you can't do that to chocolate that has that white powdery stuff on it.
Let's see, set a jar of honey in sunlight, or get out your double boiler to melt down chocolate and be sure to get out the molds that I'm sure everyone has.
yeah, that's the same thing. roughly. but you'd be good to go to be sure
If you're looking to have a reason.... That's probably going to over-heat the honey, which comes at a cost to flavor.
But your grocery store honey is already pasteurized. That's more controlled than your microwave, so if you were looking to feel guilty about something, save it for when your neighbor gives you some from her hive next door.