They are. For example, in this[0] crash report (found with a quick Google search), on line 77, it clearly shows that the WAKWindow function is inside the WebCore binary (statically linked). You can also find this by running class-dump on a copy of WebCore from iOS: there are many linked-in WAK classes do not have source code released as the GPL requires.
http://opensource.apple.com/source/WebCore/WebCore-955.66.1/...
The source is here: http://opensource.apple.com/source/WebCore/WebCore-955.66.1/...
EDIT: I'm probably missing something, but it appears that the wak code was present since 1.0.